FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14088895
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGCT37050.023.27759620-24
CTAGCTA41700.020.68189420-24
CTAACTA48500.017.99197425-29
GGTCCTA47800.017.92236735-39
CCTAAGG51850.016.63337340-44
GCTAACT52450.016.49973125-29
ACCTAGC14200.016.42578720-24
AGCTAAC52950.016.36929720-24
CCCTAGC14650.015.82296220-24
GTCCTAA55250.015.662045535-39
TCCTAAG55450.015.55362435-39
CTAAGGT57600.015.12290540-44
TCCTAGC16950.015.03498820-24
GCCTAGC13800.012.83292120-24
CCAGTGA74050.011.76386150-54
TAGCTAA77050.011.58560120-24
GTAGCGA78850.011.33937545-49
CGGTCCT79350.011.12294635-39
ACGGTCC79300.011.09364735-39
TAGCGAA80700.011.06158445-49
Produced by FastQC (version 0.11.5)