FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15853894
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACAT57400.06.273332
ATGTGAG49850.06.06530869
CATATGT61200.05.7638976
GTAGCAT44209.094947E-115.37477739
ATATGAG87650.05.2255911
ACATATG61700.05.13380155
TAGTCAT55553.6379788E-125.05419646
Produced by FastQC (version 0.11.5)