FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13643665
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA33850.024.45630320-24
CCTAGCT36050.022.96382520-24
CTAACTA40850.020.37144725-29
GGTCCTA46200.018.35568435-39
AGCTAAC47950.017.35484920-24
CCTAAGG48250.017.30753540-44
GCTAACT48250.017.06808725-29
TAGCTAA50400.016.79687320-24
CTAAGGT51200.016.76026340-44
GTCCTAA51150.016.38228835-39
TCCTAAG53000.015.83761935-39
ACCTAGC14200.015.51260420-24
TCCTAGC16150.014.62018820-24
CCCTAGC13400.014.61220520-24
GCCTAGC15600.012.5515120-24
TAACTAT78100.011.26357525-29
CCAGTGA79150.010.80572950-54
TAGCGAA80100.010.78523545-49
TAAGGTA85500.010.49123240-44
GTAGCGA87700.09.91626845-49
Produced by FastQC (version 0.11.5)