FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19016346
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTTTA138250.07.2387289
TTCACTC121450.06.69874578
ATTCACT129650.06.44166377
GATTCAC123000.06.32166156
TCACTCC132850.06.2323079
GTTAACC47450.05.493035125-129
CGTTAAC46150.05.36694125-129
GTTCCTC229000.05.15779072
Produced by FastQC (version 0.11.5)