Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005186123 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14011845 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGACA | 11335 | 0.0 | 8.019032 | 1 |
CATGACA | 8950 | 0.0 | 7.2310343 | 1 |
CACTATA | 4270 | 0.0 | 6.2383018 | 9 |
AACACTA | 4030 | 1.8189894E-12 | 6.073688 | 7 |
TATGCAA | 11395 | 0.0 | 5.9347453 | 1 |
TATGACC | 9345 | 0.0 | 5.836002 | 1 |
ACACTAT | 4585 | 1.8189894E-12 | 5.652697 | 8 |
TATGCAT | 5665 | 0.0 | 5.391167 | 1 |
ATGACAT | 11790 | 0.0 | 5.376698 | 2 |
CCTGACA | 7710 | 0.0 | 5.3759346 | 1 |
TATGCAC | 7195 | 0.0 | 5.3564677 | 1 |
CATGACC | 15920 | 0.0 | 5.3441205 | 1 |