FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14042759
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTAA24950.019.0516153
CGACTAA19150.016.1717913
TAGAGTA40250.014.6730482
GTAGAGT50750.012.7116731
AGAGTAA61950.010.3468263
ATACTAA49350.09.7779113
TATACTA51000.09.6030922
GAGCACA155300.08.9013999
CTATACT57850.08.6455861
AGAGCAC163700.08.4006858
GTTCCTA44750.08.2082292
GTCTAAT24950.08.07945254
GATCGGA203400.07.30552861
TTCCTAA52300.07.16077573
CTCAGAT63200.07.11087941
TCGTCTA75050.07.0055862
TCGGAAG217450.06.65725333
AAGAGCA244050.06.2244767
ATCGGAA255600.06.08646632
CCCGATA109000.06.07902152
Produced by FastQC (version 0.11.5)