FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16840748
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA62300.011.2123277
CACTATA64500.010.829899
ACACTAT67250.09.95878
AAACACT102450.07.0993966
ACCAAAC104700.07.08224633
CCAAACA118100.06.2801644
CAAACAC113400.06.09597445
ATACCAA177500.05.2706871
TACCAAA157000.05.18236062
Produced by FastQC (version 0.11.5)