FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17408669
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAG28700.013.0449716
CTAAGAG39600.09.9997518
ACCCTAA41850.08.9460135
TACCCTA46050.07.97997764
GTCCCTA29800.07.97918943
TAGCATG35400.07.7286218
CCTAAGA53250.07.30122667
TGAGTAG33758.731149E-116.19134953
TAAGAGC76600.05.5455549
AGTGAGT38301.2038072E-85.2692971
TGTACCC75900.05.1264072
ATAATTC163550.05.06650354
GTACCCT68500.05.04907463
GTGTACC87850.05.004741
Produced by FastQC (version 0.11.5)