FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15899628
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAG19052.6557245E-108.3130228
CCCTAAG19152.9649527E-108.2694566
ACCCTAA29553.6379788E-127.0642095
TACCCTA30153.6379788E-116.68479824
CCTAAGA25009.0130925E-96.62233077
GAGCACA119000.05.08116779
Produced by FastQC (version 0.11.5)