FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14424918
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG166050.06.648386
CCACTAA21951.1461763E-55.91699556
GTCCCTA18352.2670496E-45.8875873
CGTTAGG17000.05.58869515-19
GAGCCCA69400.05.5103569
GTTAGGG18400.05.476405615-19
GCGTTAG20050.05.097525615-19
Produced by FastQC (version 0.11.5)