FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12420204
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC8555.456968E-125.72623985-89
GGCTAGT9503.6379788E-125.45676985-89
TAGATCG51600.05.3301606140-144
GAGCACA132550.05.16026839
AGAGCAC134550.05.13707548
GATCGGA167250.05.088362140-144
Produced by FastQC (version 0.11.5)