FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14120830
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATGCAT57950.05.61644121
CCTTCAT200550.05.3375411
CATTACC96300.05.33254151
CCTTCAC181550.05.21887871
Produced by FastQC (version 0.11.5)