FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12658292
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGCT46450.024.70386320-24
CTAGCTA49200.023.38158420-24
GGTCCTA54450.021.1533235-39
AGCTAAC54450.020.88918320-24
GCTAACT57500.020.03420325-29
ACCTAGC15900.019.64965220-24
GTCCTAA58200.019.64192235-39
CTAACTA58900.019.58245525-29
CCTAAGG58650.019.5157840-44
CTAAGGT59850.019.36504440-44
CCCTAGC14800.018.28893720-24
GCCTAGC14350.018.05979720-24
TCCTAAG65950.017.37739635-39
TCCTAGC18800.017.07808920-24
TAGCTAA72550.016.15396920-24
GTAGCGA76550.015.27210845-49
TAGCGAA76300.015.22779945-49
CCAGTGA74600.015.20887750-54
ACCAGTG86900.013.37098950-54
AGGTAGC90500.012.93387740-44
Produced by FastQC (version 0.11.5)