FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13112616
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA37350.014.0715799
ACCACTC47750.011.9114418
AACCACT64200.08.8593667
AAACCAC104400.05.79281146
GGCCTAA21750.05.29632575-79
TCCGTTA82700.05.13637973
CCGTTAA77700.05.0962684
Produced by FastQC (version 0.11.5)