FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12632193
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT91650.030.097842
CCAGTCG143550.019.2422621
AGTCGTG58250.017.1848143
AGTCGTA76200.016.728013
AGTCGTC70400.08.2858733
GTCGTAT88300.07.91110234
GTCGTGT91650.06.6790154
GTCGTCT65600.05.37920674
Produced by FastQC (version 0.11.5)