FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14164582
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGACC5451.6007107E-106.86980630-34
GACCTAG5952.5465852E-116.777330435-39
TCTAGAC5451.1459633E-96.605582730-34
ACCTAGC6351.2732926E-106.350411435-39
CCTAGCT6858.276402E-105.88687835-39
GAGCACA111250.05.56556659
CCTCTAG7456.344635E-95.41214430-34
CTCTAGA7352.622437E-85.289858330-34
AGAGCAC117600.05.26504478
Produced by FastQC (version 0.11.5)