FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15572838
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGCGG133450.010.4129679
CATAGCG107200.06.5821388
TGGACCT51400.05.85525520-24
TACTTCA207150.05.79911471
TACTTGT129300.05.57441571
TACATAC110050.05.29252151
CACTTAA56500.05.15435361
TAAGTGC59400.05.0252781
Produced by FastQC (version 0.11.5)