FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15169463
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA47950.012.9123747
CACTATA56500.011.8513939
ACACTAT54800.011.430728
AAACACT89300.06.93335156
CCAAACA107300.06.3070224
ACCAAAC97200.06.295773
CAAACAC105350.06.2870885
Produced by FastQC (version 0.11.5)