FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15611205
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT70550.011.9374388
CCCCTTA51400.011.9033654
AACACTA74200.011.1561997
CACTATA83450.010.0058499
GTACCCC67150.09.6902711
TACCCCT75200.09.1900112
CAAACAC100350.08.535545
ACCCCTT89250.07.90372473
AAACACT119750.07.69373566
ACCAAAC127800.06.92768573
CCAAACA144900.06.35851244
TATTTAG114800.06.08208049
CCCTTAT121000.05.8891325
Produced by FastQC (version 0.11.5)