FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15026484
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTTA39900.010.2882814
CCCTTAG41550.010.04943755
ACTAAAC56700.09.26879
CTTAGAG50200.08.6045187
TTAGAGC49550.08.4268138
CATACTA65400.07.3752396
TAACTCA73750.07.3522521
CCTTAGA55450.07.27052076
TAGAGCC58750.07.10720979
CTCATAC82550.06.8048484
ACTCATA106450.05.55062533
TCATACT121700.05.08736235
Produced by FastQC (version 0.11.5)