FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12788072
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA29300.022.79987120-24
CCTAGCT29400.022.47746820-24
CTAACTA37600.017.76689525-29
CCCTAGC11350.016.1097920-24
GGTCCTA42550.015.83589535-39
CCTAAGG41750.015.82915140-44
AGCTAAC43350.015.44350620-24
GCTAACT43850.015.23455325-29
ACCTAGC11100.014.91615620-24
CTAAGGT47500.014.12517240-44
TAGCTAA49000.014.04474420-24
GTCCTAA49250.013.82774135-39
TCCTAAG50800.013.15075235-39
GCCTAGC12200.012.98120320-24
TCCTAGC14500.011.91503420-24
TAGCGAA66850.010.53202545-49
GTAGCGA69150.010.09843445-49
CCCCTAG5550.09.85764115-19
CCAGTGA74750.09.14947250-54
ACCCTAG6550.09.01207815-19
Produced by FastQC (version 0.11.5)