FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12788072
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT89650.035.0285262
CCAGTCG123100.025.610321
AGTCGTA71850.021.9501973
AGTCGTG53250.017.851533
GTCGTAT92200.011.3255214
AGTCGTC70900.010.3603653
GTCGTGT71300.08.2821954
GTCGTCT73750.05.07764674
Produced by FastQC (version 0.11.5)