FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14123854
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGCT149750.08.6540468
ACCCCGC152000.08.1640931
CCCTCGC162300.08.0292247
CTCGCTG200600.06.56800849
TCACTTA43800.06.246502115-119
TAGCACC43400.06.105040695-99
CCCGCCC243650.05.7325633
GCCCTCG276450.05.39097456
GTTACCC54250.05.388273735-39
CGCCCTC273900.05.2308785
CCGCCCT270000.05.039784
Produced by FastQC (version 0.11.5)