FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20674556
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTACGG146250.011.7628739
CTCGTGT57850.06.4714365
TAGTGTA40500.06.3995156
GTGTACG103450.06.1240578
TGTCTCG77500.05.48119352
CTGTACG187500.05.1450618
GTAGTGT50502.5465852E-115.1322975
Produced by FastQC (version 0.11.5)