FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17315910
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA59150.013.8750257
CACTATA69100.012.8147689
ACACTAT69800.012.3768338
CAAACAC111150.07.90201435
ACCAAAC114350.07.75026373
AAACACT115350.07.5518176
CCAAACA118150.07.43610054
CCACTCA53800.05.7549
GCCCTTA73750.05.46820934
TAGCCCT73100.05.1254082
Produced by FastQC (version 0.11.5)