FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16190145
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG33150.09.9902785
CCCCTTA36900.09.7557434
CCTTAGA47600.07.86501746
TTAGAGC46400.07.75963268
CTTAGAG51750.06.95605377
TAGAGCC57500.06.01121859
Produced by FastQC (version 0.11.5)