FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17518011
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGTAG38900.07.9577196
GTAGCAT65050.06.0867459
CTGTAGC58150.06.0662087
TAGTCAT68850.05.85536246
CCTCAGT44902.5465852E-115.45374063
CTCAGTG39053.5324774E-95.34623344
TATAGTC88750.05.0291474
GTGTCTC48852.8012437E-105.01053438
Produced by FastQC (version 0.11.5)