FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14689255
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGCT44900.019.75282320-24
GGTCCTA51050.017.42949935-39
CTAGCTA51850.017.41059520-24
CCTAAGG54500.016.37893140-44
GTCCTAA62350.014.52467335-39
CCCTAGC17600.014.31595120-24
CTAACTA67250.013.61810725-29
CTAAGGT70700.012.72773140-44
GCTAACT71750.012.7238725-29
TCCTAAG73550.012.35204535-39
GCCTAGC16400.012.20297720-24
AGCTAAC75900.011.93173820-24
ACCTAGC19600.011.82672820-24
TCCTAGC19900.011.06963320-24
TAGCGAA84750.010.78761245-49
GTAGCGA88200.010.5452145-49
CGGTCCT93400.09.98896135-39
CCAGTGA94000.09.74195250-54
TAGCTAA103850.09.39978720-24
ACGGTCC100150.09.35884435-39
Produced by FastQC (version 0.11.5)