FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14689255
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT108850.038.438432
CCAGTCG147050.029.138981
AGTCGTA90100.023.415883
AGTCGTG62700.022.7386843
GTCGTAT117250.011.4222074
AGTCGTC82550.010.1183243
GTCGTGT87400.09.3092984
GTCGTCT88150.06.53457834
Produced by FastQC (version 0.11.5)