FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16843835
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG31200.010.8436658
TGAGTAG28800.08.9979893
AGTGAGT32850.07.7900941
GTGAGTA35050.06.7781572
CCTTTAG54450.06.08128554
TAGGAGG55300.05.20677767
GAGTAGG58300.05.18580534
Produced by FastQC (version 0.11.5)