FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17594826
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGC23350.09.8697783
CTAGCAA26200.09.068515
ACTAGCA29650.08.0133214
CTACACA35900.07.8215624
TAGCAAC44750.06.27472736
TTACTAG41600.06.05925132
TACACAT62700.05.1673555
Produced by FastQC (version 0.11.5)