FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17594826
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGC25450.09.3359423
CTAGCAA25450.09.0530355
ACTAGCA31200.07.8461454
CTACACA39250.06.78725344
TAGCAAC46356.184564E-115.2815476
TACACAT61050.05.07124765
Produced by FastQC (version 0.11.5)