FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005186735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18700375
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCTGT1630900.8721215483646719No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAGCCAATCTCGTAT1029410.550475592067004TruSeq Adapter, Index 7 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)