FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15242608
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGC29250.011.0766283
CTAGCAA30050.09.822985
ACTAGCA33950.09.7552954
AACACTA60800.07.8152747
CACTATA63000.07.77111969
ACACTAT66400.06.9393018
TTACTAG58950.05.98567342
AAACACT87900.05.9791286
CAACACT71450.05.34044558
CAAACAC104350.05.24354465
TAGCAAC59200.05.22938446
Produced by FastQC (version 0.11.5)