FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17063263
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG33400.09.9161218
AGTGAGT39300.07.25205371
TTAACCC48950.05.58921969
AACACTA62550.05.52515367
ACACTAT57700.05.49044238
CCTTTAG65900.05.3532584
CACTATA58700.05.27412759
GTGAGTA46002.764864E-105.16498142
Produced by FastQC (version 0.11.5)