FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15902265
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC100200.025.096713
TACACAT100150.024.004425
ACACATC116350.020.4748366
ATACACA122350.020.3770284
CTTATAC130450.018.2749581
CACATCT129300.018.0878777
TTATACA143000.016.4812372
CATCTGA164300.014.6321229
ACATCTG177000.013.4194178
TAGATCT64300.06.455857835-39
GTAGATC91100.05.75158735-39
TACACAC50655.456968E-125.25796845
CTAGTGT14350.05.147886830-34
Produced by FastQC (version 0.11.5)