FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15678657
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCACA68700.06.4967119
CAACATA73750.06.14971644
ACTCTAG14050.06.047415730-34
ATACAAC79400.05.7973371
CTAGAGC17100.05.38985335-39
ATACCAC88250.05.30216268
AACATAC81650.05.20144375
ACATACC78400.05.14139136
CACACTA18400.05.086622710-14
Produced by FastQC (version 0.11.5)