FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18158287
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA28800.015.9942388
ACACTAC49200.010.2402139
CCACACT70150.06.9768177
CCTAGAC15000.06.913985120-124
ACACTAT56950.06.82458268
CACTATA60100.06.34713139
AACACTA59300.06.19001347
CTAGACC16350.06.0788093120-124
GATCGGA171250.05.1531081
TGGGGGG42301.8346327E-85.00002431
Produced by FastQC (version 0.11.5)