FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13340201
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG6150.040.9904443
TCTAGCC11300.022.2986725
CTAGCCG11150.021.9528966
ATCTAGC11600.021.7219814
TGATCTA40850.06.70009852
Produced by FastQC (version 0.11.5)