FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12968681
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGA6603.5851372E-713.1044021
CTGAGAG45950.012.0777241
CTAGAAC7201.0393414E-612.002273
TGAGAGG48000.011.2521292
GAGAGGC70850.08.537963
AGAGGCT93200.07.10757164
CTGGTCT89750.06.81873239
TCTAGAA13450.00157556546.4250072
CAGTGGT61400.06.3324934
AGTGGTA69300.05.7141115
AGGCTGG108200.05.2567716
Produced by FastQC (version 0.11.5)