FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005186924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005186924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12968681
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGA7950.025.3764741
CTAGAAC9350.021.5602383
GACTCAC26800.016.1308361
ACTCACT31900.014.2282582
TCTAGAA15500.012.0849122
CTCACTC44050.010.1333463
TCACTCT56600.07.75926354
ACTCTGG58300.07.4094876
CTCTGGG64750.07.1161597
CACTCTG73200.06.0980045
TCTGGGA99250.05.29540828
CTGGGAG104150.05.11545859
Produced by FastQC (version 0.11.5)