Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005186933 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16314761 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 8105 | 0.0 | 12.82936 | 1 |
GCCCCCG | 4535 | 0.0 | 10.1596775 | 9 |
CGTGCGA | 4040 | 0.0 | 9.9789295 | 7 |
TGCCCCC | 5550 | 0.0 | 8.171933 | 8 |
TCGGAAG | 14705 | 0.0 | 7.6403375 | 3 |
AGAGCAC | 14515 | 0.0 | 7.3900356 | 8 |
GAGCACA | 16710 | 0.0 | 6.807034 | 9 |
GCGTGCG | 6275 | 0.0 | 6.080501 | 6 |
GTGCGAT | 7125 | 0.0 | 5.860307 | 8 |
TTGCCCC | 8900 | 0.0 | 5.419535 | 7 |
GGGGGGT | 1890 | 0.0 | 5.3327074 | 30-34 |
ATCGGAA | 21000 | 0.0 | 5.2294855 | 2 |
CGGGGGG | 2065 | 0.0 | 5.0899596 | 30-34 |