FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14923652
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAATTGC103300.09.8263445
TTGCCTC104200.09.0505868
AATTGCC109850.09.0438256
TGCCTCC121450.07.8836489
ATTGCCT137600.07.5338547
GTAATAA158850.06.68257331
ATAATTG156150.06.54832274
CTAATCG34550.05.792678480-84
CTCGAGT36950.05.49424220-24
Produced by FastQC (version 0.11.5)