FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14923652
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAATTGC103400.09.7483625
AATTGCC103700.09.2383936
TTGCCTC107450.09.1843398
TGCCTCC122500.07.82076559
ATTGCCT138700.07.21891747
ATAATTG157350.06.58851964
GTAATAA165800.06.01768971
CTCGAGT34250.05.760051320-24
CTAATCG38000.05.72170480-84
Produced by FastQC (version 0.11.5)