FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187110

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187110
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9959539
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCACG14055.5069177E-67.69091844
GATCGGA105350.06.60495761
CTAGGGT4401.8645933E-66.21833215-19
TCGGAAG122600.05.8759973
ATCGGAA137150.05.77924972
TAATAGC36252.7994247E-95.5986511
TAGTTTG20802.0713228E-45.5383455
TAAAGTG35355.26652E-85.33110571
GACTAGC4752.4452916E-45.152882120-124
TAAAGCA63100.05.05424931
TAATGCA46001.2332748E-95.04226351
Produced by FastQC (version 0.11.5)