FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13203972
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACAAGT91950.013.5162671
ACAAGTT118900.010.9032872
CAAGTTT146300.09.0571023
TTTTCTC204200.06.5928288
AGTTTTT248650.06.13776455
AAGTTTT246600.05.60682964
TTTCTCC257500.05.53573669
GAGTGTA52150.05.27349985-89
GTTTTTC289450.05.24811036
GTAGCAT56250.05.01736555-59
Produced by FastQC (version 0.11.5)