FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14289852
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA58350.08.2687595
CAGTGGT66850.07.2183944
GGTATCA99450.05.93741238
GTATCAA102750.05.8168049
GTGGTAT95000.05.68521746
TGGTATC106850.05.3917097
GGGGGGG57800.05.37896541
CTAGTGG7004.92073E-85.34758715-19
AGCAGTG98100.05.06609252
Produced by FastQC (version 0.11.5)