FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15334941
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA37700.09.3593687
CACTATA41050.08.4201249
ACACTAT43250.08.158348
CGTTTAG27504.00074E-75.7609943
AAACACT79450.05.61939576
ACATACT78650.05.58519743
TACATAC77250.05.4062
ACCAAAC79800.05.32422643
ACTGTAG46550.05.258513530-34
Produced by FastQC (version 0.11.5)