FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11288094
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCCTA21300.013.5174229
CGTGAGT30600.08.5511441
GTGAGTG30800.08.416712
TGAGTGC49900.05.91518073
CCACTGT42403.6379788E-125.82849171
GAGTGCA51650.05.7143084
ACTAATG25401.8050201E-55.4370461
CACTGTG46701.4551915E-115.39686632
TTAGAGC23151.6705948E-45.28580868
Produced by FastQC (version 0.11.5)