FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005187187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005187187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15507831
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA60500.014.637267
ACACTAT60050.014.6270568
CACTATA70600.012.7479169
CAAACAC97950.09.5551875
AAACACT96050.09.519556
ACCAAAC111950.08.232223
TAGCCCT70100.07.90867662
CCAAACA112850.07.847564
GCCCTTA72950.06.9088194
TATTTAG88050.06.2964439
TACCAAA184100.05.7099222
GTAGCCC107300.05.04783731
Produced by FastQC (version 0.11.5)